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病毒基因组
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基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV22460055 hCoV-19/mink/Spain/GA-R_000871-21-116/2021 EPI_ISL_19096325 RNA virus Severe acute respiratory syndrome coronavirus 2 Spain 2021-03-17 Mustela lutreola 29628 2024-05-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Laboratorio Central de Veterinaria Iglesias-Caballero, M. Camarero, S. Pozo, F. Casas, I. Jiménez, P. Zaballos, A.Varona, S. Monzón, S.Cuesta, I. Agüero, M. Instituto de Salud Carlos III 29626 99.99
OEAV22460057 hCoV-19/mink/Spain/GA-R_000871-21-62/2021 EPI_ISL_19096329 RNA virus Severe acute respiratory syndrome coronavirus 2 Spain 2021-03-17 Mustela lutreola 29628 2024-05-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Laboratorio Central de Veterinaria Iglesias-Caballero, M. Camarero, S. Pozo, F. Casas, I. Jiménez, P. Zaballos, A.Varona, S. Monzón, S.Cuesta, I. Agüero, M. Instituto de Salud Carlos III 29625 99.99
OEAV22460062 hCoV-19/mink/Spain/GA-R_001677-21-52/2021 EPI_ISL_19096315 RNA virus Severe acute respiratory syndrome coronavirus 2 Spain 2021-06-09 Mustela lutreola 29609 2024-05-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Laboratorio Central de Veterinaria Iglesias-Caballero, M. Camarero, S. Pozo, F. Casas, I. Jiménez, P. Zaballos, A.Varona, S. Monzón, S.Cuesta, I. Agüero, M. Instituto de Salud Carlos III 29609 100.00
OEAV22460067 hCoV-19/mink/Spain/GA-R_002026-21-100/2021 EPI_ISL_19096319 RNA virus Severe acute respiratory syndrome coronavirus 2 Spain 2021-07-19 Mustela lutreola 29612 2024-05-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Laboratorio Central de Veterinaria Iglesias-Caballero, M. Camarero, S. Pozo, F. Casas, I. Jiménez, P. Zaballos, A.Varona, S. Monzón, S.Cuesta, I. Agüero, M. Instituto de Salud Carlos III 29611 100.00
OEAV22460068 hCoV-19/mink/Spain/GA-R_002026-21-101/2021 EPI_ISL_19096320 RNA virus Severe acute respiratory syndrome coronavirus 2 Spain 2021-07-19 Mustela lutreola 29612 2024-05-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Laboratorio Central de Veterinaria Iglesias-Caballero, M. Camarero, S. Pozo, F. Casas, I. Jiménez, P. Zaballos, A.Varona, S. Monzón, S.Cuesta, I. Agüero, M. Instituto de Salud Carlos III 29611 100.00
OEAV22460072 hCoV-19/mink/Spain/GA-R_004000-20-15/2021 EPI_ISL_19096334 RNA virus Severe acute respiratory syndrome coronavirus 2 Spain 2021-01-21 Mustela lutreola 29628 2024-05-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Laboratorio Central de Veterinaria Iglesias-Caballero, M. Camarero, S. Pozo, F. Casas, I. Jiménez, P. Zaballos, A.Varona, S. Monzón, S.Cuesta, I. Agüero, M. Instituto de Salud Carlos III 29628 100.00
OEAV22460078 hCoV-19/mink/Spain/GA-R_220721-3/2021 EPI_ISL_19096312 RNA virus Severe acute respiratory syndrome coronavirus 2 Spain 2021-06-09 Mustela lutreola 29603 2024-05-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Laboratorio Central de Veterinaria Iglesias-Caballero, M. Camarero, S. Pozo, F. Casas, I. Jiménez, P. Zaballos, A.Varona, S. Monzón, S.Cuesta, I. Agüero, M. Instituto de Salud Carlos III 29603 100.00
OEAV22460081 hCoV-19/mink/Spain/GA-R_220721-46/2021 EPI_ISL_19096307 RNA virus Severe acute respiratory syndrome coronavirus 2 Spain 2021-06-09 Mustela lutreola 29609 2024-05-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Laboratorio Central de Veterinaria Iglesias-Caballero, M. Camarero, S. Pozo, F. Casas, I. Jiménez, P. Zaballos, A.Varona, S. Monzón, S.Cuesta, I. Agüero, M. Instituto de Salud Carlos III 29609 100.00
OEAV3245552 SARS-CoV-2/ferret/USA/G211/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433206 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29540 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29280 99.12
OEAV3245553 SARS-CoV-2/ferret/USA/G212/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433207 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29540 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29540 100.00
OEAV3245554 SARS-CoV-2/ferret/USA/G213/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433208 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29540 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29540 100.00
OEAV3245555 SARS-CoV-2/ferret/USA/G214/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433209 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29540 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29540 100.00
OEAV3245556 SARS-CoV-2/ferret/USA/G241/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433210 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29540 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29540 100.00
OEAV3245558 SARS-CoV-2/ferret/USA/G243/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433212 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29540 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29540 100.00
OEAV3245560 SARS-CoV-2/ferret/USA/G441/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433214 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29531 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29531 100.00
OEAV3245562 SARS-CoV-2/ferret/USA/G443/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433216 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29531 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29531 100.00
OEAV3245563 SARS-CoV-2/ferret/USA/G444/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433217 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29531 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29531 100.00
OEAV3245566 SARS-CoV-2/ferret/USA/G453/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433220 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29531 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29355 99.40
OEAV3245567 SARS-CoV-2/ferret/USA/G454/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433221 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29531 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29147 98.70
OEAV8857399 hCoV-19/ferret/USA/FL-21-028281-001/2021 EPI_ISL_5781754 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-09-18 Mustela furo 29789 2021-10-30 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Bronson Animal Disease Diagnostic Laboratory Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29789 100.00
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